FORUMCategory: BioinformaticsVariant annotation
ramaniak Staff asked 2 years ago



What is the best method for annotating variants from WES or WGS data?

1 Answers
jstafford answered 2 years ago



Though a full description would be a little long for just a quick Q and A, you are probably going to be interested in using one of the GATK “best practices” pipelines. These are very heavily annotated and documented, see https://software.broadinstitute.org/gatk/best-practices/